Publications
You can also view my Google Scholar profile to get the current list of my publications.
- Cesar A. López, Anurag Sethi, Byron Goldstein, Bridget Wilson, and S. Gnanakaran, “Membrane-mediated regulation of the intrinsically disordered CD3ε cytoplasmic tail of the TCR”, Biophys. J., Submitted.
- modENCODE Consortium including Anurag Sethi, “Comparative analysis of the transcriptome across distant species”, Nature, 512:445-448. Highlighted in Nature News and Views and ScienceDaily.
- Anurag Sethi, Divina Anunciado, Jianhui Tian, Dung M Vu, and S Gnanakaran, “Deducing conformational variability of intrinsically disordered proteins from infrared spectroscopy with Bayesian statistics”, Chem. Phys., 422:143-155, 2013.
- Jaemyeong Jung, Anurag Sethi, Tiziano Gaiotto, Jason J Han, Tina Jeoh, S Gnanakaran, and Peter M Goodwin, “Binding and movement of individual Cel7A cellobiohydrolases on crystalline cellulose surfaces revealed by single-molecule fluorescence imaging”, J Biol Chem, 288:24164-24172, 2013.
- Dahai Gao, Shishir PS Chundawat, Anurag Sethi, Venkatesh Balan, S Gnanakaran, and Bruce E Dale, “Increased enzyme binding to substrates is not necessary for more efficient cellulose hydrolysis”, Proc. Natl. Acad. Sci., 110:10922-10927, 2013. Highlighted in Science Daily.
- Anurag Sethi, Jianhui Tian, Cynthia Derdeyn, Bette Korber, and S Gnanakaran, “A mechanistic understanding of allosteric immune escape pathways in the HIV-1 envelope protein”, PLoS Comp. Biol., 9:e1003046, 2013. Highlighted in MDLinx.
- Meghan K Murphy, Ling Yue, Ruimin Yue, Saikat Boliar, Anurag Sethi, Jianhui Tian, Katja Pfafferot, Etienne Karita, Susan A Allen, Emmanuel Cormier, Paul A Goepfert, Persephone Borrow, James E Robinson, S Gnanakaran, Eric Hunter, Xiang-Peng Kong, and Cynthia A Derdeyn, “Viral escape from neutralizing antibodies in early subtype A HIV-1 infection drives an increase in autologous neutralization breadth”, PLoS Pathogens, 9:e1003173, 2013.
- Jianhui Tian, Anurag Sethi, Byron Goldstein, and S. Gnanakaran, “Taste of sugar at the membrane: Thermodynamics and kinetics of the interaction of a disaccharide with lipid bilayers”, Biophys. J., 104:622-632, 2013.
- Anurag Sethi, Jianhui Tian, Dung M Vu, and S Gnanakaran, “Identification of Minimally Interacting Modules in an Intrinsically Disordered Protein”, Biophys. J., 103:748-757, 2012. Highlighted in News and Views of Biopolymers.
- Andrea Asztalos, Marcus Daniels, Anurag Sethi, Tongye Shen, Paul Langan, Antonio Redondo, and S. Gnanakaran, “A coarse-grained model for synergistic action of multiple enzymes on cellulose”, Biotech. for Biofuels, 5:55.
- Jianhui Tian, Anurag Sethi, Dung M Vu, and S Gnanakaran, “Characterization of a disordered protein during micellation: Interactions of alpha-synuclein with sodium dodecyl sulfate”, J. Phys. Chem. B, 116:4417-4424, 2012.
- Anurag Sethi, Byron Goldstein, and S Gnanakaran, “Quantifying intramolecular binding in multivalent interactions: a structure-based synergestic study on Grb2-Sos1 complex”, PLoS Comput. Biol., 10:e1002192, 2011.
- Rebecca M Lynch, Rong Rong, Saikat Boliar, Anurag Sethi, Bing Li, Joseph Mulenga, Susan Allen, James E Robinson, S Gnanakaran, and Cynthia A Derdeyn, “The B cell response is redundant and highly focused on V1/V2 during early subtype C infection in a Zambian seroconvertor”, J. Virol., 85:905-915, 2011.
- S Gnanakaran, Marcus G Daniels, Tanmoy Bhattacharya, Alan S Lapedes, Anurag Sethi, Ming Li, Haili Tang, Kelli Greene, Hongmei Gao, Barton F Haynes, Myron S Cohen, George M Shaw, Michael S Seaman, Amit Kumar, Feng Go, David C Montefiori, and Bette Korber, “Genetic signatures in the envelope proteins of HIV-1 that associate with broadly neutralizing antibodies”,PLoS Comput. Biol., 6(10): e1000955, 2010.
- Alexis Black Pyrkosz, John Eargle, Anurag Sethi, and Zaida Luthey-Schulten, “Exit strategies for charged tRNA from GluRS”, J. Mol. Biol., 397:1350-1371, 2010.
- Krishnarjun Sarkar, Konrad Meister, Anurag Sethi(1), Martin Gruebele1, “Folding of an RNA tetraloop on a rugged energy landscape using a stacking-sensitive probe”, Biophys. J., 97:1418-1427, 2009.
- Anurag Sethi(2), John Eargle(2), Alexis Black, and Zaida Luthey-Schulten, “Dynamical networks in tRNA:protein complexes”, Proc. Natl. Acad. Sci., 106:6620-6625, 2009. Highlight
- Elijah Roberts, Anurag Sethi, Jonathan Montoya, Carl R Woese, and Zaida Luthey-Schulten. “Molecular signatures of ribosomal evolution”, Proc. Natl. Acad. Sci., 105:13953–13958, 2008. Highlight
- John Eargle, Alexis Black, Anurag Sethi, Leonardo Trabuco, and Zaida Luthey-Schulten. “Dynamics of Recognition between tRNA and Elongation Factor-Tu”,J. Mol. Biol., 377:382–405, 2008.
- Rommie Amaro(2) , Anurag Sethi(2) , Rebecca Myers, Jo V Davisson, and Zaida Luthey-Schulten. “A network of conserved interactions regulates the allosteric signal in a glutamine amidotransferase.” Biochem., 46:2156–2173, 2007.
- Patrick O’Donoghue(2) , Anurag Sethi(2), Carl R Woese, and Zaida Luthey-Schulten. “Evolutionary history of Cys-tRNACys formation.” Proc. Natl. Acad. Sci., 102: 19003–19008, 2005.
- Anurag Sethi, Patrick O’Donoghue, and Zaida Luthey-Schulten. “Evolutionary profiles from the QR factorization of multiple sequence alignments.” Proc. Natl. Acad. Sci., 102:4045–4050, 2005.
- Abhishek Mathur, Anurag Sethi, Vishwanath Jogini, Yogesh Bhargava, BL Tembe, and Anil K Lala. “Energetics of insertion of soluble proteins into membrane.” Current Science, 87:181-189, 2004.
- Ritu D Dhawan, Simon Joseph, Anurag Sethi, and Anil K Lala. “Purification and characterization of a short insect toxin from the venom of the scorpion Buthus tamulus.” Febbs Letters, 528:261-266, 2002.
(1) - co-corresponding Author
(2) - shared first author
(2) - shared first author